| ncRNA ID | ath-miR5639-5p |
| Species | Arabidopsis thaliana |
| Class | miRNA |
| Genome position | chr2:10356782-10357163 [+] |
| Reference genome | TAIR10 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 3 - UAGUCCACUGUGGUCUAAGGC - 23 |
| Stem-loop(if miRNA) |
A A A -A CAU UC UG - G A C A UAU G CA G GGU -UA --- UUG AGUAGUCCACUGUGGUCU AGGCUGAAAUGCGGUGACC G CU GAAAA GUCAAUGGUGG CUUG AAAGGGUUGACAAAGAAG UCUA GGAGACGGUG CA GUCGG UCUCUGGCC GU AGUGCUAAAA AUUAUG UAUUGGUUGCUUAAA GUCAUAUUGCCAC CG ACU A |||||||||||||||||| ||||||||||||||||||| | || ||||| ||||||||||| |||| |||||||||||||||||| |||| |||||||||| || ||||| ||||||||| || |||||||||| |||||| ||||||||||||||| ||||||||||||| || ||| UCAUCAGGUGGCACCAGA UCCGAUUUUAUGCCACUGG C GA CUUUU UAGUUACCACC GAAC UUUCCCAACUGUUUUUUU AGAU CCUCUGUCAC GU CGGCC AGAGAUCGG UA UCACGAUUUU UAAUAU AUAACCGACGAAUUU CAGUAUAACGGUG GU UGG G C G - GC AAC CU GU U G C A A UGG G UC A --- UUG AAG UAA |
| Stem-loop sequence | AGUAGUCCACUGUGGUCUAAGGCUGAAAUGCGGUGACCAGACUAGAAAACAUGUCAAUGGUGGUCCUUGUGAAAGGGUUGACAAAGAAGUCUAGGGAGACGGUGACACGUCGGAUCUCUGGCCUAUGUGAGUGCUAAAACAAUUAUGGUAUUGGUUGCUUAAAGGUGUCAUAUUGCCACUACGACUUUGAGAAUGGUGAAUGGUUGUGGCAAUAUGACUUUAAGCAGCCAAUAAUAUAAUCUUUUUAGCACUGAUGGUGGCUAGAGAACCGGCAUGCCACUGUCUCCGUAGAUUUUUUUUGUCAACCCUUUUGCAAGUCCCACCAUUGAUCAAUUUUCCGAGCGGGUCACCGUAUUUUAGCCUCAGACCACGGUGGACUACU |
| 1 | PMID:21940835
"High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis"; Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN; Genome Res. 22:163-176(2012). |