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BaseInfo

ncRNA ID bna-miR162a
Species Brassica napus
Class miRNA
Genome position EM:EX071254:614-727 [-]
Reference genome BrassicaDB-20080411
Source miRBase
Length 21
Mature sequence(if miRNA) 15 - UCGAUAAACCUGUGCAUCCAG - 35
Stem-loop(if miRNA) ------A    AAGA       G   GC    G        C  UG  --GGAAU     A
       GUGA    UGCUGGA GCA  GGUU AUCGAUCU UU  UG       UUUUG A
       ||||    ||||||| |||  |||| |||||||| ||  ||       ||||| A
       CGCU    GCGACCU CGU  CCAA UAGCUAGA AA  AC       AAAAC A
ACUUCUC    ---G       A   GU    A        C  GU  GAAAAUU     A
Stem-loop sequence AGUGAAAGAUGCUGGAGGCAGCGGUUGAUCGAUCUCUUUGUGGGAAUUUUUGAAAAACAAAAUUAAAAGCAUGAACAGAUCGAUAAACCUGUGCAUCCAGCGGUCGCCUCUUCA

Reference

1 PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes";
Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ;
Plant Physiol. 158:813-823(2012).