ncRNA ID | bna-miR162a |
Species | Brassica napus |
Class | miRNA |
Genome position | EM:EX071254:614-727 [-] |
Reference genome | BrassicaDB-20080411 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 15 - UCGAUAAACCUGUGCAUCCAG - 35 |
Stem-loop(if miRNA) |
------A    AAGA       G   GC    G        C  UG  --GGAAU     A        GUGA    UGCUGGA GCA  GGUU AUCGAUCU UU  UG       UUUUG A        ||||    ||||||| |||  |||| |||||||| ||  ||       ||||| A        CGCU    GCGACCU CGU  CCAA UAGCUAGA AA  AC       AAAAC A ACUUCUC    ---G       A   GU    A        C  GU  GAAAAUU     A |
Stem-loop sequence | AGUGAAAGAUGCUGGAGGCAGCGGUUGAUCGAUCUCUUUGUGGGAAUUUUUGAAAAACAAAAUUAAAAGCAUGAACAGAUCGAUAAACCUGUGCAUCCAGCGGUCGCCUCUUCA |
1 | PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes"; Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ; Plant Physiol. 158:813-823(2012). |