ncRNA ID | bna-miR167c |
Species | Brassica napus |
Class | miRNA |
Genome position | EM:EV043346:100-233 [+] |
Reference genome | BrassicaDB-20080411 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 18 - UGAAGCUGCCAGCAUGAUCUA - 38 |
Stem-loop(if miRNA) |
AC - U U A C UA - UU --- UA GGUGC CGG CA C G UGAAGCUGC AGCAUGAUCUAGU AC UUUAU C UCCGUUGUU U ||||| ||| || | | ||||||||| ||||||||||||| || ||||| | ||||||||| C CUACG GUC GU G C ACUUUGAUG UUGUACUAGAUUA UG GAAUA G AGGUAACAG C CU A U C C C GC U GG AAA UA |
Stem-loop sequence | GGUGCACCGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAGUUAACUUUAUUUCUCCGUUGUUUAUCCAUGACAAUGGAAAAGGGAUAAGUGUCGAUUAGAUCAUGUUCGUAGUUUCACCCGUUGACUGUCGCAUC |
1 | PMID:17659282
"Cloning and characterization of microRNAs from Brassica napus"; Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL; FEBS Lett. 581:3848-3856(2007). |
2 | PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes"; Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ; Plant Physiol. 158:813-823(2012). |