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BaseInfo

ncRNA ID bna-miR168b
Species Brassica napus
Class miRNA
Genome position EM:EV007136:150-279 [+]
Reference genome BrassicaDB-20080411
Source miRBase
Length 21
Mature sequence(if miRNA) 17 - UCGCUUGGUGCAGGUCGAGAA - 37
Stem-loop(if miRNA) ACC   -UU    G      C          U  A  A      G CUAA    -U   CG   U
   GUC   GCUC GAUUCG UUGGUGCAGG CG GA CUAAUU U    CACA  CCA  AAG U
   |||   |||| |||||| |||||||||| || || |||||| |    ||||  |||  ||| U
   UAG   CGAG CUAAGU AACUACGUUC GC CU GGUUAG G    GUGU  GGU  UUC U
-GC   UCC    G      U          C  C  A      G ACGA    UU   CG   A
Stem-loop sequence ACCGUCUUGCUCGGAUUCGCUUGGUGCAGGUCGAGAACUAAUUGUCUAACACAUCCACGAAGUUUUACUUGCUGGUUUGUGAGCAGGGAUUGGAUCCCGCCUUGCAUCAAUUGAAUCGGAGCCCUGAUCG

Reference

1 PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes";
Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ;
Plant Physiol. 158:813-823(2012).