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BaseInfo

ncRNA ID	bna-miR860
Species	Brassica napus
Class	miRNA
Genome position	EM:EE553293:196-310 [+]
Reference genome	BrassicaDB-20080411
Source	miRBase
Length	21
Mature sequence(if miRNA)	80 - UCAAUACAUUGGACUACAUAU - 100
Stem-loop(if miRNA)	-        U                   C       G    --AG    C      U  UGGUCAAG GUAAUGUAUGUAGUCCAAU UAUUGAA UACU    CACA CAUCUC A  |||||||| ||||||||||||||||||| ||||||| ||||    |||| ||||||  ACUAGUUU CAUUAUAUACAUCAGGUUA AUAACUU AUGA    GUGU GUAGAG G A        U                   C       G    GUUG    A      U
Stem-loop sequence	UGGUCAAGUGUAAUGUAUGUAGUCCAAUCUAUUGAAGUACUAGCACACCAUCUCUAGUGAGAUGAUGUGGUUGAGUAGUUCAAUACAUUGGACUACAUAUAUUACUUUUGAUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_013788556.1	ncRNA:21   UAUACAUCAGGUUACAUAACU   1   =|||||||||||||*|||||| targets:1667   GUAUGUAGUCCAAUCUAUUGA   1687 Target Full Sequence	1.5	PREDICTED: Brassica napus ferrochelatase-1, chloroplastic/mitochondrial-like (LOC106348754), mRNA	ferrochelatase-1, chloroplastic/mitochondrial-like(LOC106348754)	coding protein	psRNATarget

Reference

1	PMID:22138974 "Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes"; Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ; Plant Physiol. 158:813-823(2012).