ncRNA ID | bna-miR2111a-3p |
Species | Brassica napus |
Class | miRNA |
Genome position | EM:ED537952:191-341 [-] |
Reference genome | BrassicaDB-20080411 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 23 - GUCCUCGGGAUGCGGAUUACC - 43 |
Stem-loop(if miRNA) |
GAUGACAA U CC -UUU -UGAUUAU ---AC C GUAU GGUGAGGA GGGUAAUCUGCAUCCUGAGG AAAGCU ACGCAUA AUGC G |||| |||||||| |||||||||||||||||||| |||||| ||||||| |||| CAUA UCAUUCCU UCCAUUAGGCGUAGGGCUCC UUUCGA UGUGUAU UACG A -GCACAUG - UC UGAU UAAGAUUU CAAUA C |
Stem-loop sequence | GAUGACAAGUAUUGGUGAGGACCGGGUAAUCUGCAUCCUGAGGUUUAAAGCUUGAUUAUACGCAUAACAUGCCGACGCAUAUAACUAUGUGUUUUAGAAUAGCUUUUAGUCCUCGGGAUGCGGAUUACCUCUUCCUUACUAUACGUACACG |
1 | PMID:19465578
"Identification of nutrient-responsive Arabidopsis and rapeseed microRNAs by comprehensive real-time polymerase chain reaction profiling and small RNA sequencing"; Pant BD, Musialak-Lange M, Nuc P, May P, Buhtz A, Kehr J, Walther D, Scheible WR; Plant Physiol. 150:1541-1555(2009). |
2 | PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes"; Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ; Plant Physiol. 158:813-823(2012). |