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BaseInfo

ncRNA ID bna-miR167c
Species Brassica napus
Class miRNA
Genome position EM:DX037998:153-286 [-]
Reference genome BrassicaDB-20080411
Source miRBase
Length 21
Mature sequence(if miRNA) 97 - UGAAGCUGCCAGCAUGAUCUA - 117
Stem-loop(if miRNA)      AC   -  U U A         C             UA  -     UU ---         UA
GGUGC  CGG CA C G UGAAGCUGC AGCAUGAUCUAGU  AC UUUAU  C   UCCGUUGUU  U
|||||  ||| || | | ||||||||| |||||||||||||  || |||||  |   |||||||||  C
CUACG  GUC GU G C ACUUUGAUG UUGUACUAGAUUA  UG GAAUA  G   AGGUAACAG  C
     CU   A  U C C         C             GC  U     GG AAA         UA
Stem-loop sequence GGUGCACCGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAGUUAACUUUAUUUCUCCGUUGUUUAUCCAUGACAAUGGAAAAGGGAUAAGUGUCGAUUAGAUCAUGUUCGUAGUUUCACCCGUUGACUGUCGCAUC

Reference

1 PMID:17659282
"Cloning and characterization of microRNAs from Brassica napus";
Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL;
FEBS Lett. 581:3848-3856(2007).
2 PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes";
Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ;
Plant Physiol. 158:813-823(2012).