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BaseInfo

ncRNA ID bna-miR167a
Species Brassica napus
Class miRNA
Genome position EM:DX028242:512-643 [-]
Reference genome BrassicaDB-20080411
Source miRBase
Length 22
Mature sequence(if miRNA) 94 - UGAAGCUGCCAGCAUGAUCUAA - 115
Stem-loop(if miRNA)      -    G  UCU A         C             UA  U   UU     GUUGA      G
GGUGU ACAG CA   G UGAAGCUGC AGCAUGAUCUAAU  AC UUC  UCUCU     UUUUAU A
||||| |||| ||   | ||||||||| |||||||||||||  || |||  |||||     ||||||
CCACG UGUC GU   C ACUUUGACG UUGUACUAGAUUA  UG GAG  AGAGA     AAGGUA C
     C    A  UAC C         C             GC  U   -U     ----A      A
Stem-loop sequence GGUGUACAGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAAUUAACUUUCUUUCUCUGUUGAUUUUAUGACAAUGGAAAAGAGAUGAGUGUCGAUUAGAUCAUGUUCGCAGUUUCACCCAUUGACUGUCGCACC

Reference

1 PMID:17659282
"Cloning and characterization of microRNAs from Brassica napus";
Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL;
FEBS Lett. 581:3848-3856(2007).