ncRNA ID | bna-miR168a |
Species | Brassica napus |
Class | miRNA |
Genome position | EM:DU984956:260-392 [-] |
Reference genome | BrassicaDB-20080411 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 96 - UCGCUUGGUGCAGGUCGGGAA - 116 |
Stem-loop(if miRNA) |
     G   C   U  C              U     A      --G   G   CC    --     C UUACG CGG CUC GA UCGCUUGGUGCAGG CGGGA CUGAUU   GCU ACA  GCCA  CGUGG U ||||| ||| ||| || |||||||||||||| ||||| ||||||   ||| |||  ||||  ||||| AGUGC GCC GAG CU AGUGAACUAUGUUC GCCCU GGCUAG   CGA UGU  CGGU  GUACC U      A   U   C  A              C     A      GGA   G   -U    UG     U |
Stem-loop sequence | UUACGGCGGCCUCUGACUCGCUUGGUGCAGGUCGGGAACUGAUUGGCUGACACCGCCACGUGGCUUUCCAUGGUUGGCUUGUGAGCAGGGAUCGGAUCCCGCCUUGUAUCAAGUGAAUCCGAGUCCGACGUGA |
1 | PMID:17659282
"Cloning and characterization of microRNAs from Brassica napus"; Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL; FEBS Lett. 581:3848-3856(2007). |
2 | PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes"; Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ; Plant Physiol. 158:813-823(2012). |