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BaseInfo

ncRNA ID bna-miR168a
Species Brassica napus
Class miRNA
Genome position EM:DU984956:260-392 [-]
Reference genome BrassicaDB-20080411
Source miRBase
Length 21
Mature sequence(if miRNA) 96 - UCGCUUGGUGCAGGUCGGGAA - 116
Stem-loop(if miRNA)      G   C   U  C              U     A      --G   G   CC    --     C
UUACG CGG CUC GA UCGCUUGGUGCAGG CGGGA CUGAUU   GCU ACA  GCCA  CGUGG U
||||| ||| ||| || |||||||||||||| ||||| ||||||   ||| |||  ||||  |||||
AGUGC GCC GAG CU AGUGAACUAUGUUC GCCCU GGCUAG   CGA UGU  CGGU  GUACC U
     A   U   C  A              C     A      GGA   G   -U    UG     U
Stem-loop sequence UUACGGCGGCCUCUGACUCGCUUGGUGCAGGUCGGGAACUGAUUGGCUGACACCGCCACGUGGCUUUCCAUGGUUGGCUUGUGAGCAGGGAUCGGAUCCCGCCUUGUAUCAAGUGAAUCCGAGUCCGACGUGA

Reference

1 PMID:17659282
"Cloning and characterization of microRNAs from Brassica napus";
Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL;
FEBS Lett. 581:3848-3856(2007).
2 PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes";
Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ;
Plant Physiol. 158:813-823(2012).