Search result

BaseInfo

ncRNA ID bna-miR167b
Species Brassica napus
Class miRNA
Genome position EM:CT022223:635-758 [-]
Reference genome BrassicaDB-20080411
Source miRBase
Length 22
Mature sequence(if miRNA) 86 - UGAAGCUGCCAGCAUGAUCUAA - 107
Stem-loop(if miRNA)     CAC   -  U U A         C               --U   ---     C      
GGCG   CGG CA C G UGAAGCUGC AGCAUGAUCUAAUUA   CUU   UCUUU UCUGUUG
||||   ||| || | | ||||||||| |||||||||||||||   |||   ||||| ||||||A
CCGC   GUC GU G C ACUUUGACG UUGUACUAGAUUAGU   GAG   AGAAA AGGUAGC
    UCU   A  U C C         C               UGU   UAC     -      
Stem-loop sequence GGCGCACCGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAAUUAUCUUUCUUUCUCUGUUGACGAUGGAAAAGACAUGAGUGUUGAUUAGAUCAUGUUCGCAGUUUCACCCGUUGACUGUCUCGCC

Reference

1 PMID:17659282
"Cloning and characterization of microRNAs from Brassica napus";
Wang L, Wang MB, Tu JX, Helliwell CA, Waterhouse PM, Dennis ES, Fu TD, Fan YL;
FEBS Lett. 581:3848-3856(2007).