ncRNA ID | bna-miR2111b-3p |
Species | Brassica napus |
Class | miRNA |
Genome position | EM:BH986382:375-493 [+] |
Reference genome | BrassicaDB-20080411 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 83 - AUCCUCGGGAUACAGAUUACC - 103 |
Stem-loop(if miRNA) |
GCACUUGAU      CU         C         U        --AC   G      G          GAGGAA  GGUAAUCUG AUCCUGAGG UUAAAAAU    AUA GCACAU C          ||||||  ||||||||| ||||||||| ||||||||    ||| ||||||          UUCCUU  CCAUUAGAC UAGGGCUCC AAUUUUUG    UAU UGUGUA A -AAGUCAUU      CU         A         U        AUAU   G      A |
Stem-loop sequence | GCACUUGAUGAGGAACUGGUAAUCUGCAUCCUGAGGUUUAAAAAUACAUAGGCACAUGCAAAUGUGUGUAUUAUAGUUUUUAAUCCUCGGGAUACAGAUUACCUCUUCCUUUUACUGAA |
1 | PMID:19465578
"Identification of nutrient-responsive Arabidopsis and rapeseed microRNAs by comprehensive real-time polymerase chain reaction profiling and small RNA sequencing"; Pant BD, Musialak-Lange M, Nuc P, May P, Buhtz A, Kehr J, Walther D, Scheible WR; Plant Physiol. 150:1541-1555(2009). |