ncRNA ID | bna-miR6034 |
Species | Brassica napus |
Class | miRNA |
Genome position | EM:BH421046:416-542 [-] |
Reference genome | BrassicaDB-20080411 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 23 - UCUGAUGUAUAUAGCUUUGGG - 43 |
Stem-loop(if miRNA) |
         C                        C         U G             UA AUAUACUCU AAGCAUAUCAACUCCGAAGCUAUA ACAUCGGAU U UCCGACAUUGUAU  G ||||||||| |||||||||||||||||||||||| ||||||||| | |||||||||||||  A UAUAUGAGA UUCGUAUAGUUGGGGUUUCGAUAU UGUAGUCUA A AGGUUGUAACAUA  C          A                        A         C G             UA |
Stem-loop sequence | AUAUACUCUCAAGCAUAUCAACUCCGAAGCUAUACACAUCGGAUUUGUCCGACAUUGUAUUAGACAUAUACAAUGUUGGAGACAUCUGAUGUAUAUAGCUUUGGGGUUGAUAUGCUUAAGAGUAUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_013889578.1 |
|
2.5 | PREDICTED: Brassica napus ribosomal protein S2, mitochondrial (LOC106447611), mRNA | ribosomal protein S2, mitochondrial(LOC106447611) | coding protein | psRNATarget |
1 | PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes"; Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ; Plant Physiol. 158:813-823(2012). |