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BaseInfo

ncRNA ID bna-miR6029
Species Brassica napus
Class miRNA
Genome position EM:AC189547:50957-51072 [-]
Reference genome BrassicaDB-20080411
Source miRBase
Length 21
Mature sequence(if miRNA) 14 - UGGGGUUGUGAUUUCAGGCUU - 34
Stem-loop(if miRNA) AAG                   C    AA            G         --C    GG
   AGAUACACAAGCCAAGCCU AAAU  ACAAUCCCAACA AUUACAAAU   AUUU  C
   ||||||||||||||||||| ||||  |||||||||||| |||||||||   ||||
   UCUAUGUGUUCGGUUCGGA UUUA  UGUUGGGGUUGU UAAUGUUUA   UAAG  C
---                   C    -G            A         CUU    UU
Stem-loop sequence AAGAGAUACACAAGCCAAGCCUCAAAUAAACAAUCCCAACAGAUUACAAAUCAUUUGGCCUUGAAUUUCAUUUGUAAUAUGUUGGGGUUGUGAUUUCAGGCUUGGCUUGUGUAUCU

Reference

1 PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes";
Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ;
Plant Physiol. 158:813-823(2012).