Search result

BaseInfo

ncRNA ID bna-miR6036
Species Brassica napus
Class miRNA
Genome position EM:AC189214:37840-37994 [-]
Reference genome BrassicaDB-20080411
Source miRBase
Length 24
Mature sequence(if miRNA) 11 - AUAGUACUAGUACUUGCAUGAUCA - 34
Stem-loop(if miRNA) UCAGUUA  --CUCA      UCU     -       A      UUAUUUUAUA     -  G  CG  UG       -AGUG  GU
       GC      GUGGUU   CGGGU CUAGUAU UAUAUU          UGGUA AC GG  GU  UUGUGGA     AU  U
       ||      ||||||   ||||| ||||||| ||||||          ||||| || ||  ||  |||||||     ||  U
       CG      UACUAG   GUUCA GAUCAUG AUAUAA          AUCAU UG UU  UA  AACACUU     UA  A
------A  UAUAUG      UAC     U       -      ----------     A  G  AG  GU       AAGAA  AA
Stem-loop sequence UCAGUUAGCCUCAGUGGUUUCUCGGGUCUAGUAUAUAUAUUUUAUUUUAUAUGGUAACGGGCGGUUGUUGUGGAAGUGAUGUUUAAAAUAAGAAUUCACAAUGAUGAUUGGUAUACUAAAUAUAGUACUAGUACUUGCAUGAUCAUGUAUAUGCA

Reference

1 PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes";
Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ;
Plant Physiol. 158:813-823(2012).