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BaseInfo

ncRNA ID bna-miR6032
Species Brassica napus
Class miRNA
Genome position EM:AC189188:93338-93437 [+]
Reference genome BrassicaDB-20080411
Source miRBase
Length 21
Mature sequence(if miRNA) 17 - UGGAGCAUCAACAGAUCUCGG - 37
Stem-loop(if miRNA) U     U    U          -    A        G   --  UG   GA
 UAUUU GUUU AACAUGGAGC AUCA CAGAUCUC GAG  CA  UAA  U
 ||||| |||| |||||||||| |||| |||||||| |||  ||  |||
 AUAAA CAAA UUGUACCUUG UGGU GUCUAGGG CUC  GU  GUU  C
A     U    -          C    C        G   CU  UU   GU
Stem-loop sequence UUAUUUUGUUUUAACAUGGAGCAUCAACAGAUCUCGGAGCAUGUAAGAUCUGUUGUUUGUCCUCGGGGAUCUGCUGGUCGUUCCAUGUUAAACUAAAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_013794457.1
ncRNA:21   GGCUCUAGACAACUACGAGGU   1
  *=||||*|||||||||*||||
targets:665   AUGAGAGCUGUUGAUGAUCCA   685

2.5 PREDICTED: Brassica napus isoflavone reductase homolog P3-like (LOC106354505), mRNA isoflavone reductase homolog P3-like(LOC106354505) coding protein psRNATarget

Reference

1 PMID:22138974
"Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes";
Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ;
Plant Physiol. 158:813-823(2012).