ncRNA ID | ath-miRf11189-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - UACUCGACCUGAGGGUCGAGUAG - NA |
Stem-loop(if miRNA) |
  --U          GA          G  -     G  ----       AAA   A GG   UACUCGACCU  GGGUCGAGUA AU GGGUA AA    UGGCUCC   GUC C ||   ||||||||||  |||||||||| || ||||| ||    |||||||   ||| CC   AUGAGCUGGA  UCCGGCUCAU UA CUCGU UU    ACUGGGG   CAG U   UGU          -G          G  G     G  AUGA       GAC   C |
Stem-loop sequence | GGUUACUCGACCUGAGGGUCGAGUAGAUGGGUAGAAUGGCUCCAAAGUCACUCGACCAGGGGGUCAAGUAUUGUGCUCGAUGUACUCGGCCUGAGGUCGAGUAUGUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT025674.1 |
|
1.5 | Arabidopsis thaliana | NA | coding protein | psRNATarget | |||||||||
NM_103391.1 |
|
1.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget | |||||||||
BT015478.1 |
|
2.5 | Arabidopsis thaliana At4g05636 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
BT014714.1 |
|
2.5 | Arabidopsis thaliana At4g05636.1 mRNA sequence | NA | coding protein | psRNATarget |