ncRNA ID | ath-miR5013 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr2:7166817-7166975 [+] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 52 - UUUGUGACAUCUAGGUGCUUU - 72 |
Stem-loop(if miRNA) |
   U    --U      G    UG    GC AUACA                        C              U   UUC GGA CUGU   CAUAAC AAGU  UUGG  G     UCAUUUAGUAGACAAGGUUUGUGA AUCUAGGUGCUUUU UUU   U ||| ||||   |||||| ||||  ||||  |     |||||||||||||||||||||||| |||||||||||||| |||   U UCU GACA   GUGUUG UUCG  GAUC  C     AGUAAAUCAUCUGUUCCAAAUACU UAGAUCCACGAGAA AAA   C    U    UUC      -    UG    UA -----                        A              C   UAU |
Stem-loop sequence | GGAUCUGUUCAUAACGAAGUUGUUGGGCGAUACAUCAUUUAGUAGACAAGGUUUGUGACAUCUAGGUGCUUUUUUUUUUCUUCUAUAAACAAGAGCACCUAGAUAUCAUAAACCUUGUCUACUAAAUGACAUCUAGGUGCUUGUUGUGCUUACAGUUCU |
1 | PMID:21357774
"MicroRNA activity in the Arabidopsis male germline"; Borges F, Pereira PA, Slotkin RK, Martienssen RA, Becker JD; J Exp Bot. 62:1611-1620(2011). |