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BaseInfo

ncRNA ID ath-miRf11182-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - ACUCGACCUAGGGGUCGAGUA - NA
Stem-loop(if miRNA)    GAGG           AGG        A   -GG    A
GCU    AUACUCGACCU   GGUCGAGU GAU   GAAG A
|||    |||||||||||   |||||||| |||   |||| U
CGG    UAUGAGCUGGG   CCAGCUCA CUG   CUUC G
   ----           GGA        -   AAA    A
Stem-loop sequence GCUGAGGAUACUCGACCUAGGGGUCGAGUAGAUGGGAAGAAUGACUUCAAAGUCACUCGACCAGGGGGUCGAGUAUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT025674.1
ncRNA:21   AUGAGCUGGGGAUCCAGCUCA   1
  |||||||||||*|||||||||
targets:188   UACUCGACCCCCAGGUCGAGU   208

1.5 Arabidopsis thaliana NA coding protein psRNATarget
BT015478.1
ncRNA:21   AUGAGCUGGGGAUCCAGCUCA   1
  |||||||||||*|||||||||
targets:137   UACUCGACCCCCAGGUCGAGU   157

1.5 Arabidopsis thaliana At4g05636 mRNA sequence NA coding protein psRNATarget
BT014714.1
ncRNA:21   AUGAGCUGGGGAUCCAGCUCA   1
  |||||||||||*|||||||||
targets:137   UACUCGACCCCCAGGUCGAGU   157

1.5 Arabidopsis thaliana At4g05636.1 mRNA sequence NA coding protein psRNATarget
NM_103391.1
ncRNA:21   AUGAGCUGGGGAUCCAGCUCA   1
  *||||||||||*|||||||||
targets:1105   CACUCGACCCCCAGGUCGAGU   1125

1.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
AY227642.1
ncRNA:21   AUGAGCUGGGGAUCCAGCUCA   1
  *||||||||||*|||||||||
targets:855   CACUCGACCCCGAGGUCGAGU   875

1.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183042.1
ncRNA:21   AUGAGCUGGGGAUCCAGCUCA   1
  *||||||||||*|||||||||
targets:1618   CACUCGACCCCGAGGUCGAGU   1638

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget