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BaseInfo

ncRNA ID ath-miRf11177-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UUACUCGACCCAGGGGUCGAGUA - NA
Stem-loop(if miRNA) GACAU         CA             CAAUUCGCCA  CCACCUGACC
     UACUCGACC  GGGGUCGAGUAAU          CA          A
     |||||||||  |||||||||||||          ||
     AUGAGCUGG  CCCCAGCUCAUUG          CU          C
CUACU         UC             CACCAUCUCA  UACCAGCUCA
Stem-loop sequence GACAUUACUCGACCCAGGGGUCGAGUAAUCAAUUCGCCACACCACCUGACCACACUCGACCAUUCACUCUACCACGUUACUCGACCCCCUGGUCGAGUAUCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT012022.1
ncRNA:23   AUGAGCUGG-GGACCCAGCUCAUU   1
  *||||||||-|||||||||||||*
targets:209   CACUCGACCACCUGGGUCGAGUAC   232

3.0 Arabidopsis thaliana At2g10890 mRNA sequence NA coding protein psRNATarget
EF183192.1
ncRNA:23   AUGAGCUGG-GGACCCAGCUCAUU   1
  *||||||||-|||||||||||||*
targets:851   CACUCGACCACCUGGGUCGAGUAC   874

3.0 Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence NA coding protein psRNATarget
EF183193.1
ncRNA:23   AUGAGCUGG-GGACCCAGCUCAUU   1
  *||||||||-|||||||||||||*
targets:1178   CACUCGACCACCUGGGUCGAGUAC   1201

3.0 Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence NA coding protein psRNATarget
EF183191.1
ncRNA:23   AUGAGCUGG-GGACCCAGCUCAUU   1
  *||||||||-|||||||||||||*
targets:1226   CACUCGACCACCUGGGUCGAGUAC   1249

3.0 Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence NA coding protein psRNATarget