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BaseInfo

ncRNA ID ath-miR8168
Species Arabidopsis thaliana
Class miRNA
Genome position chr2:5080634-5080714 [+]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 57 - AGGUGCUGAGUGUGCUAGUGC - 77
Stem-loop(if miRNA)     U   GUU      -  -        ---U   --A   U
CGGU UAU   GUAUAC CA UACUUCCU    AUU   CCU G
|||| |||   |||||| || ||||||||    |||   ||| U
GCCA GUG   CGUGUG GU GUGGAGGG    UAG   GGA U
    C   -AU      A  C        UUCU   CCC   C
Stem-loop sequence CGGUUUAUGUUGUAUACCAUACUUCCUUAUUACCUUGUUCAGGCCCGAUUCUUGGGAGGUGCUGAGUGUGCUAGUGCACCG

Reference

1 PMID:24119003
"Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots";
Vidal EA, Moyano TC, Krouk G, Katari MS, Tanurdzic M, McCombie WR, Coruzzi GM, Gutierrez RA;
BMC Genomics. 14:701(2013).