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BaseInfo

ncRNA ID	ath-miRf11164-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - UCACUCGACCUCGAGGUCGAGUGU - NA
Stem-loop(if miRNA)	C           U            ---U    ---     C  CACCU    AUC        ACGUCACUCUA     AA        ----U      CACCACUGUUAAAU  CGAGGCCGACUCA UCA AUCACUCGACC CGAGGUCGAGUG    CUUC   ACCUC AC     GACC   ACUCGAUC           CCUUG  GUCGAGUA     CUUCAU              GC             A ||| ||||||||||| ||||||||||||    ||||   ||||| ||     ||||   ||||||||           |||||  ||||||||     ||||||              ||             A AGU UGGUGAGCUGG GCUCCAGCUCAU    GAAG   UGGAG UG     CUGG   UGAGCUGG           GGGAC  CAGCUCAU     GAAGUA              AG             U    U           U            CUUC    UUC     U  ----U    ---        -----------     --        CCCCU      ----------UUAA  UAGAGCAAAAUGC
Stem-loop sequence	UCACAUCACUCGACCUCGAGGUCGAGUGUCUUCACCUCCACCACCUGACCAUCACUCGAUCACGUCACUCUACCUUGAAGUCGAGUAUCUUCAUCACCACUGUUAAAUGCCGAGGCCGACUCAAAUCGUAAAACGAGAUGAAAUUAUGAAGUCCCCUACUCGACCAGGGGGUCGAGUGGUCUGUUGAGGUCUUGAAGCUUCUACUCGACCUCGUGGUCGAGUGGUUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183005.1	ncRNA:24   UGUGAGCUGGAGCUCCAGCUCACU   1   =||||||||||||||||||||||| targets:1864   GCACUCGACCUCGAGGUCGAGUGA   1887 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:24   UGUGAGCUGGAGCUCCAGCUCACU   1   *|||||||||*||||||||||||* targets:1150   CCACUCGACCACGAGGUCGAGUGU   1173 Target Full Sequence	2.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:24   UGUGAGCUGGAGCUCCAGCUCACU   1   *|||||||||*||||||||||||* targets:854   CCACUCGACCCCGAGGUCGAGUGC   877 Target Full Sequence	2.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   UGUGAGCUGGAGCUCCAGCUCACU   1   *|||||||||*||||||||||||* targets:1617   UCACUCGACCCCGAGGUCGAGUGU   1640 Target Full Sequence	2.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   UGUGAGCUGGAGCUCCAGCUCACU   1   *|||||||||||||||*||||||* targets:1675   UCACUCGACCUCGAGGCCGAGUGU   1698 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   UGUGAGCUGGAGCUCCAGCUCACU   1   |=||||||||*|*||||||||||| targets:136   AUACUCGACCCCCAGGUCGAGUGA   159 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   UGUGAGCUGGAGCUCCAGCUCACU   1   |=||||||||*|*||||||||||| targets:136   AUACUCGACCCCCAGGUCGAGUGA   159 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget