ncRNA ID | novel_gar_miR2219 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:79165015-79165186 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUUCGGAUUAAUUCGAUGAGGCAU - 24 |
Stem-loop(if miRNA) |
--    GG      U    -G    A    G  CCAAUU   UUC           UAA   -  UAGGUGUCAAUUUAUUAUUUCGAAU   CUUC  AUUAAU CGAU  AGGC UUGG UG      UAC   GAUUUAGCCAA   GAC AC                         U   ||||  |||||| ||||  |||| |||| ||      |||   |||||||||||   ||| ||                         A   GGGG  UAAUUG GCUA  UCUG GACU AC      AUG   CUAGGUUGGUU   GUG AG                         U AU    -A      U    AG    A    G  -----U   UAC           -UU   U  UUAAACCAUGGGUUGUGGAGUAACC |
Stem-loop sequence | CUUCGGAUUAAUUCGAUGAGGCAUUGGGUGCCAAUUUACUUCGAUUUAGCCAAUAAGACACUAGGUGUCAAUUUAUUAUUUCGAAUUAUCCAAUGAGGUGUUGGGUACCAAAUUGAUGUGUUUUGGUUGGAUCCAUGUAUCAGUCAGAGUCUGAAUCGUGUUAAUAGGGGUA |