ncRNA ID | novel_gar_miR2214 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:44176549-44176653 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGAUGUUGAGGUAGAAAUUGGCA - 24 |
Stem-loop(if miRNA) |
--   A                 GCAAUUUAG G      GUAUAUCAUUUAGGUAUU   AAG UGUUGAGGUAGAAAUUG         A CUGAAU                  U   ||| |||||||||||||||||         | ||||||   UUC GUAAUUUCAUUUUUGGC         U UUGAAG                  U AG   -                 --------- -      AAACUUCUUUCGGACACC |
Stem-loop sequence | AAGAUGUUGAGGUAGAAAUUGGCAAUUUAGAGCUGAAUGUAUAUCAUUUAGGUAUUUUCCACAGGCUUUCUUCAAAGAAGUUUCGGUUUUUACUUUAAUGCUUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017777038.1 |
|
1.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108475017 (LOC108475017), mRNA | uncharacterized LOC108475017(LOC108475017) | coding protein | psRNATarget |