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BaseInfo

ncRNA ID novel_gar_miR2212
Species Gossypium arboreum
Class miRNA
Genome position Chr3:25307234-25307352 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 20
Mature sequence(if miRNA) 1 - UGACAGUAGCUGAACCGGCU - 20
Stem-loop(if miRNA) --U   -        -AA C    --CA         AAGGG   U  -     C      GG
   GAC AGUAGCUG   C GGCU    GGGUGCCAU     UGU GC ACCUG AUCAUU  A
   ||| ||||||||   | ||||    |||||||||     ||| || ||||| ||||||
   CUG UCGUUGAU   G CCGG    CCUACGGUG     GCG CG UGGAU UGGUAG  C
UAG   C        GGC A    UAAC         --GCA   U  G     A      UA
Stem-loop sequence UGACAGUAGCUGAACCGGCUCAGGGUGCCAUAAGGGUGUUGCACCUGCAUCAUUGGACAUGAUGGUAUAGGUGGCUGCGACGGUGGCAUCCCAAUGGCCAGCGGUAGUUGCUCGUCGAU