ncRNA ID | novel_gar_miR2212 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:25307234-25307352 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UGACAGUAGCUGAACCGGCU - 20 |
Stem-loop(if miRNA) |
--U   -        -AA C    --CA         AAGGG   U  -     C      GG    GAC AGUAGCUG   C GGCU    GGGUGCCAU     UGU GC ACCUG AUCAUU  A    ||| ||||||||   | ||||    |||||||||     ||| || ||||| ||||||    CUG UCGUUGAU   G CCGG    CCUACGGUG     GCG CG UGGAU UGGUAG  C UAG   C        GGC A    UAAC         --GCA   U  G     A      UA |
Stem-loop sequence | UGACAGUAGCUGAACCGGCUCAGGGUGCCAUAAGGGUGUUGCACCUGCAUCAUUGGACAUGAUGGUAUAGGUGGCUGCGACGGUGGCAUCCCAAUGGCCAGCGGUAGUUGCUCGUCGAU |