ncRNA ID | novel_gar_miR2208 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:36848769-36848912 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUUAGGCGGAUCGGUACGACGGAG - 24 |
Stem-loop(if miRNA) |
---- UU   CG       A   C    -  UCUC   GA    GCAUUUAUAAAUUG      ----       UUUU    U     C  AGG  GAUCGGU CGA GGAG CC    AGU  CCAC              GUUACA    UUUAUGG    AAUU A     |  |||  ||||||| ||| |||| ||    |||  ||||              ||||||    |||||||    ||||     G  UCC  UUGGUCA GUU UUUC GG    UCA  GGUG              CAAUGU    AGGUAUC    UUAG A UUGG UU   UU       -   -    A  UCUU   --    ------------AA      UUUU       -CUU    A |
Stem-loop sequence | CUUAGGCGGAUCGGUACGACGGAGCCUCUCAGUGACCACGCAUUUAUAAAUUGGUUACAUUUAUGGUUUUAAUUUAAAGAUUUUCCUAUGGAUUUUUGUAACAAGUGGACUUUCUGGACUUUUUGACUGGUUUUCCUUUGGGUU |