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BaseInfo

ncRNA ID novel_gar_miR2208
Species Gossypium arboreum
Class miRNA
Genome position Chr10:36848769-36848912 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - CUUAGGCGGAUCGGUACGACGGAG - 24
Stem-loop(if miRNA) ---- UU   CG       A   C    -  UCUC   GA    GCAUUUAUAAAUUG      ----       UUUU    U
    C  AGG  GAUCGGU CGA GGAG CC    AGU  CCAC              GUUACA    UUUAUGG    AAUU A
    |  |||  ||||||| ||| |||| ||    |||  ||||              ||||||    |||||||    ||||
    G  UCC  UUGGUCA GUU UUUC GG    UCA  GGUG              CAAUGU    AGGUAUC    UUAG A
UUGG UU   UU       -   -    A  UCUU   --    ------------AA      UUUU       -CUU    A
Stem-loop sequence CUUAGGCGGAUCGGUACGACGGAGCCUCUCAGUGACCACGCAUUUAUAAAUUGGUUACAUUUAUGGUUUUAAUUUAAAGAUUUUCCUAUGGAUUUUUGUAACAAGUGGACUUUCUGGACUUUUUGACUGGUUUUCCUUUGGGUU