ncRNA ID | novel_gar_miR2207 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr3:40142618-40142831 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAUGAUGAUUUAAUGUGUCAUGU - 24 |
Stem-loop(if miRNA) |
--AUA                             U                     AU UC                 ------------GAGCAAU    UUUUUUUUAAUU      ACAUGUUAAAUCAUUAUUUCAAACAAAAA UUUAAGUUAAAUUAUACAAUU  U  UUAUAUUUUUUUGUUUU                   UUAA            U      ||||||||||||||||||||||||||||| |||||||||||||||||||||  |  |||||||||||||||||                   ||||      UGUGUAAUUUAGUAGUAAAGUUUGUUUUU AAAUUCAAUUUAAUAUGUUAA  A  AAUAUGAAAAAACAAAG                   AAUG            U UGUAC                             U                     CC GA                 GGAUAUUUCUUUUUUUUUC    UAAUUAUAUUUU |
Stem-loop sequence | AUAACAUGUUAAAUCAUUAUUUCAAACAAAAAUUUUAAGUUAAAUUAUACAAUUAUUUCUUAUAUUUUUUUGUUUUGAGCAAUUUAAUUUUUUUUAAUUUUUUUUAUAUUAAUGUAACUUUUUUUUUCUUUAUAGGGAAACAAAAAAGUAUAAAGACCAAUUGUAUAAUUUAACUUAAAUUUUUUGUUUGAAAUGAUGAUUUAAUGUGUCAUGU |