ncRNA ID | novel_gar_miR2199 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:31280740-31280886 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 124 - GUCCGAUCUAGUCUGGCCCAUGCA - 147 |
Stem-loop(if miRNA) |
--       -             -  -----U      U   AUUUUUAUA  --G  CG         AAAAUUUUA      U   UAUGGGC GGGCUAGGUCGGA UC      GAGUUU AGC         CG   GU  AGCUUGGGC         GGCUCA U   ||||||| ||||||||||||| ||      |||||| |||         ||   ||  |||||||||         |||||| U   GUACCCG UCUGAUCUAGCCU AG      UUCAAG UCG         GC   CA  UCGGACCCG         CCGGGU U AC       G             G  UUGAUU      U   --------G  AAA  AU         -------GG      U |
Stem-loop sequence | UAUGGGCGGGCUAGGUCGGAUCUGAGUUUUAGCAUUUUUAUACGGGUCGAGCUUGGGCAAAAUUUUAGGCUCAUUUUUUGGGCCGGGCCCAGGCUUAACAAACGGGCUUGAACUUUUAGUUGAGUCCGAUCUAGUCUGGCCCAUGCA |