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BaseInfo

ncRNA ID novel_gar_miR2199
Species Gossypium arboreum
Class miRNA
Genome position Chr10:31280740-31280886 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 124 - GUCCGAUCUAGUCUGGCCCAUGCA - 147
Stem-loop(if miRNA) --       -             -  -----U      U   AUUUUUAUA  --G  CG         AAAAUUUUA      U
  UAUGGGC GGGCUAGGUCGGA UC      GAGUUU AGC         CG   GU  AGCUUGGGC         GGCUCA U
  ||||||| ||||||||||||| ||      |||||| |||         ||   ||  |||||||||         |||||| U
  GUACCCG UCUGAUCUAGCCU AG      UUCAAG UCG         GC   CA  UCGGACCCG         CCGGGU U
AC       G             G  UUGAUU      U   --------G  AAA  AU         -------GG      U
Stem-loop sequence UAUGGGCGGGCUAGGUCGGAUCUGAGUUUUAGCAUUUUUAUACGGGUCGAGCUUGGGCAAAAUUUUAGGCUCAUUUUUUGGGCCGGGCCCAGGCUUAACAAACGGGCUUGAACUUUUAGUUGAGUCCGAUCUAGUCUGGCCCAUGCA