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BaseInfo

ncRNA ID novel_gar_miR2187
Species Gossypium arboreum
Class miRNA
Genome position Chr2:71205945-71206002 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AAUGUGACACGCCAGAUUCGAGCU - 24
Stem-loop(if miRNA) --AA        G          G  AAA
    UGUGACAC CCAGAUUCGA CU   C
    |||||||| |||||||||| ||
    ACAUUGUG GGUUUGGGCU GA   U
ACUA        G          G  CCU
Stem-loop sequence AAUGUGACACGCCAGAUUCGAGCUAAACUUCCAGGUCGGGUUUGGGGUGUUACAAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017762242.1
ncRNA:24   UCGAGCUUAGACCGCACAGUGUAA   1
  =*|*||||||**||||||||||||
targets:1808   GACCCGAAUCCAGCGUGUCACAUU   1831

2.5 PREDICTED: Gossypium arboreum metallophosphoesterase 1-like (LOC108462268), transcript variant X1, mRNA metallophosphoesterase 1-like(LOC108462268) coding protein psRNATarget