ncRNA ID | novel_gar_miR2187 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr2:71205945-71206002 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUGACACGCCAGAUUCGAGCU - 24 |
Stem-loop(if miRNA) |
--AA        G          G  AAA     UGUGACAC CCAGAUUCGA CU   C     |||||||| |||||||||| ||     ACAUUGUG GGUUUGGGCU GA   U ACUA        G          G  CCU |
Stem-loop sequence | AAUGUGACACGCCAGAUUCGAGCUAAACUUCCAGGUCGGGUUUGGGGUGUUACAAUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017762242.1 |
|
2.5 | PREDICTED: Gossypium arboreum metallophosphoesterase 1-like (LOC108462268), transcript variant X1, mRNA | metallophosphoesterase 1-like(LOC108462268) | coding protein | psRNATarget |