| ncRNA ID | novel_gar_miR2185 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr2:66886385-66886607 [+] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029587 |
| Length | 21 |
| Mature sequence(if miRNA) | 203 - AUAGGGACUAAUUUGUCUAUU - 223 |
| Stem-loop(if miRNA) |
-- CUAC G GC CUA U U AUUCAU G --A CU AGA -A A UAGGCAAAUUAGUCCCU ACAUUAGAUUAAA A AAA G UCUUUCAGUU AAAA UCAUUUCUA UGUUAAAAACUGGC UGG GAU AUA CCA A ||||||||||||||||| ||||||||||||| | ||| | |||||||||| |||| ||||||||| |||||||||||||| ||| ||| ||| ||| U AUCUGUUUAAUCAGGGA UGUAAUCUAAUUU U UUU C AGGAAGUUAA UUUU GGUAAAGAU AUAAUUUUUGACCG AUC UUG UGU GGU A UU --UA G -A -AA C - GAAAAU A GGG AU --G AC G |
| Stem-loop sequence | UAGGCAAAUUAGUCCCUCUACACAUUAGAUUAAAGAGCAAACUAGUUCUUUCAGUUUAAAAAUUCAUUCAUUUCUAGUGUUAAAAACUGGCAUGGCUGAUAGAAUAACCAAAUAGUGGCAUGUGGUUUACUAGGGGCCAGUUUUUAAUAAUAGAAAUGGUAAAAGUUUUAAUUGAAGGACCAAUUUAUGUUUAAUCUAAUGUAUAGGGACUAAUUUGUCUAUU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017761048.1 |
|
1.5 | PREDICTED: Gossypium arboreum heat shock factor protein HSF8-like (LOC108461261), mRNA | heat shock factor protein HSF8-like(LOC108461261) | coding protein | psRNATarget |