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BaseInfo

ncRNA ID novel_gar_miR2181
Species Gossypium arboreum
Class miRNA
Genome position Chr2:40536570-40536712 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AAUUUGGACAAUUGGGCAAAGUUU - 24
Stem-loop(if miRNA) --   U         -   C    UU     UA    G      -    U  A  A     CA    U   UUA
  AAU UGGACAAUU GGG AAAG  UGAAU  AAAU UUCAAG UAUA AG UU GUCAA  UUUG GUC   A
  ||| ||||||||| ||| ||||  |||||  |||| |||||| |||| || || |||||  |||| |||
  UUA AUUUGUUGA UCC UUUU  AUUUA  UUUA GAGUUU AUAU UC AA UAGUU  AAAU CAG   A
AG   C         A   A    UU     --    A      U    U  A  C     -A    U   UUA
Stem-loop sequence AAUUUGGACAAUUGGGCAAAGUUUGAAUUAAAAUGUUCAAGUAUAUAGAUUAGUCAACAUUUGUGUCUUAAAAUUGACUUAAAAUUGAUCAAACUUUAUAUUUUGAGAAUUUAUUUAUUUUUUACCUAAGUUGUUUACAUUGA