ncRNA ID | novel_gar_miR2175 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:36884562-36884678 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUAGAUUGUCAUACGAGCUAUCA - 24 |
Stem-loop(if miRNA) |
----AUA   A          C  G         --------------          A  C   UU        UUG UGUGGCAGUC AU UGUAUUUUA              UAUUGAUAUG UA UAU  A        ||| |||||||||| || |||||||||              |||||||||| || |||  U        AGC AUACUGUUAG UA ACAUGAAGU              AUGAUUGUAC GU AUA  U ACUAUCG   -          A  A         ACAAAAAAUAAUAA          C  -   UU |
Stem-loop sequence | AUAUUGAUGUGGCAGUCCAUGUGUAUUUUAUAUUGAUAUGAUACUAUUUAUUUUAUAUGCCAUGUUAGUAAAUAAUAAAAAACAUGAAGUACAAAUAGAUUGUCAUACGAGCUAUCA |