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BaseInfo

ncRNA ID novel_gar_miR2175
Species Gossypium arboreum
Class miRNA
Genome position Chr1:36884562-36884678 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AAUAGAUUGUCAUACGAGCUAUCA - 24
Stem-loop(if miRNA) ----AUA   A          C  G         --------------          A  C   UU
       UUG UGUGGCAGUC AU UGUAUUUUA              UAUUGAUAUG UA UAU  A
       ||| |||||||||| || |||||||||              |||||||||| || |||  U
       AGC AUACUGUUAG UA ACAUGAAGU              AUGAUUGUAC GU AUA  U
ACUAUCG   -          A  A         ACAAAAAAUAAUAA          C  -   UU
Stem-loop sequence AUAUUGAUGUGGCAGUCCAUGUGUAUUUUAUAUUGAUAUGAUACUAUUUAUUUUAUAUGCCAUGUUAGUAAAUAAUAAAAAACAUGAAGUACAAAUAGAUUGUCAUACGAGCUAUCA