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BaseInfo

ncRNA ID novel_gar_miR2160
Species Gossypium arboreum
Class miRNA
Genome position Chr2:84956865-84956912 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 25 - AGUGAUUCGUGACUGCUUGAGGGC - 48
Stem-loop(if miRNA) ---------A  -G     U  CU   U
          GU  AUUCG GA  GCU G
          ||  ||||| ||  |||
          CA  UAGGC CU  CGG A
AUUCUUAAGA  GA     U  AU   G
Stem-loop sequence AGUGAUUCGUGACUGCUUGAGGGCUAUCUCGGAUAGACAGAAUUCUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017761035.1
ncRNA:24   CGGGAGUUCGUCAGUGCUUAGUGA   1
  *|****||||||||*|||||||||
targets:403   ACGAAGAAGCAGUCUCGAAUCACU   426

2.5 PREDICTED: Gossypium arboreum uncharacterized LOC108461253 (LOC108461253), mRNA uncharacterized LOC108461253(LOC108461253) coding protein psRNATarget