ncRNA ID | novel_gar_miR2158 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:43342085-43342254 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAGAUGACGUGGAACCACGGUUU - 24 |
Stem-loop(if miRNA) |
--      A     UA    UC     C         --          C    C A              ---UUU    C    UU   ACUGUG UUUCA  UCAU  UUAUC CUUUCUAAU  AAGAGAAUGA AAAU A AUUUUUUCUCUUGA      UUAG AUUU  A   |||||| |||||  ||||  ||||| |||||||||  |||||||||| |||| | ||||||||||||||      |||| ||||   UGGCAC AAGGU  AGUA  AAUAG GAAAGAUUA  UUUUUUUACU UUUA U UAAAAAGGAGGACU      AAUU UAGG  A UU      C     GC    GA     U         CU          U    U C              UUUUUU    -    UU |
Stem-loop sequence | ACUGUGAUUUCAUAUCAUUCUUAUCCCUUUCUAAUAAGAGAAUGACAAAUCAAAUUUUUUCUCUUGAUUUUUAGCAUUUUUAAUUGGAUUUAAUUUUUUUCAGGAGGAAAAAUCUUAUUUUUCAUUUUUUUUCAUUAGAAAGUGAUAAAGAUGACGUGGAACCACGGUUU |