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BaseInfo

ncRNA ID novel_gar_miR2158
Species Gossypium arboreum
Class miRNA
Genome position Chr1:43342085-43342254 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AAAGAUGACGUGGAACCACGGUUU - 24
Stem-loop(if miRNA) --      A     UA    UC     C         --          C    C A              ---UUU    C    UU
  ACUGUG UUUCA  UCAU  UUAUC CUUUCUAAU  AAGAGAAUGA AAAU A AUUUUUUCUCUUGA      UUAG AUUU  A
  |||||| |||||  ||||  ||||| |||||||||  |||||||||| |||| | ||||||||||||||      |||| ||||
  UGGCAC AAGGU  AGUA  AAUAG GAAAGAUUA  UUUUUUUACU UUUA U UAAAAAGGAGGACU      AAUU UAGG  A
UU      C     GC    GA     U         CU          U    U C              UUUUUU    -    UU
Stem-loop sequence ACUGUGAUUUCAUAUCAUUCUUAUCCCUUUCUAAUAAGAGAAUGACAAAUCAAAUUUUUUCUCUUGAUUUUUAGCAUUUUUAAUUGGAUUUAAUUUUUUUCAGGAGGAAAAAUCUUAUUUUUCAUUUUUUUUCAUUAGAAAGUGAUAAAGAUGACGUGGAACCACGGUUU