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BaseInfo

ncRNA ID novel_gar_miR2142
Species Gossypium arboreum
Class miRNA
Genome position Chr13:82255440-82255617 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 155 - AUCUGCCACGUGACAUGUUGACAG - 178
Stem-loop(if miRNA) --C        -      A  A  A    U      AAUC          U  A       UU           U     U   UACCAAG
   UCAAUAUG CAUGUG CG AU UAAA UUAAAA    UUUAAAAAUA AU AAUUAAU  AAAAAGUAUAA UUUUU UCA       A
   |||||||| |||||| || || |||| ||||||    |||||||||| || |||||||  ||||||||||| ||||| |||
   AGUUGUAC GUGCAC GU UA AUUU AAUUUU    AAAUUUUUAU UA UUAAUUA  UUUUUUAUAUU AAAAA AGU       A
GAC        A      C  C  C    U      --GA          U  A       -U           U     C   UCCAAGU
Stem-loop sequence CUCAAUAUGCAUGUGACGAAUAUAAAUUUAAAAAAUCUUUAAAAAUAUAUAAAUUAAUUUAAAAAGUAUAAUUUUUUUUCAUACCAAGAAUGAACCUUGACAAAAAUUUAUAUUUUUUUAUUAAUUAAUUUAUUUUUAAAAGUUUUAAUUUUACAUCUGCCACGUGACAUGUUGACAG