ncRNA ID | novel_gar_miR2142 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:82255440-82255617 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 155 - AUCUGCCACGUGACAUGUUGACAG - 178 |
Stem-loop(if miRNA) |
--C        -      A  A  A    U      AAUC          U  A       UU           U     U   UACCAAG    UCAAUAUG CAUGUG CG AU UAAA UUAAAA    UUUAAAAAUA AU AAUUAAU  AAAAAGUAUAA UUUUU UCA       A    |||||||| |||||| || || |||| ||||||    |||||||||| || |||||||  ||||||||||| ||||| |||    AGUUGUAC GUGCAC GU UA AUUU AAUUUU    AAAUUUUUAU UA UUAAUUA  UUUUUUAUAUU AAAAA AGU       A GAC        A      C  C  C    U      --GA          U  A       -U           U     C   UCCAAGU |
Stem-loop sequence | CUCAAUAUGCAUGUGACGAAUAUAAAUUUAAAAAAUCUUUAAAAAUAUAUAAAUUAAUUUAAAAAGUAUAAUUUUUUUUCAUACCAAGAAUGAACCUUGACAAAAAUUUAUAUUUUUUUAUUAAUUAAUUUAUUUUUAAAAGUUUUAAUUUUACAUCUGCCACGUGACAUGUUGACAG |