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BaseInfo

ncRNA ID novel_gar_miR2134
Species Gossypium arboreum
Class miRNA
Genome position Chr1:6841486-6841543 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 35 - CAAAACGAUGUCGUUUUGGUCGGC - 58
Stem-loop(if miRNA) ----CA     A           UC   ACC
      AAACG UGUCGUUUUGG  GGC   C
      ||||| |||||||||||  |||
      UUUGC GCAGCAAAAUC  CCG   U
GUGUAC     C           --   AAU
Stem-loop sequence CAAAACGAUGUCGUUUUGGUCGGCACCCUUAAGCCCUAAAACGACGCCGUUUCAUGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017771280.1
ncRNA:24   CGGCUGGUUUUGCUGUAGCAAAAC   1
  |==**||||||||||||||*||||
targets:112   GUUCUCCAAAACGACAUCGAUUUG   135

1.5 PREDICTED: Gossypium arboreum 40S ribosomal protein S27-2 (LOC108470075), mRNA 40S ribosomal protein S27-2(LOC108470075) coding protein psRNATarget