ncRNA ID | novel_gar_miR2134 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:6841486-6841543 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 35 - CAAAACGAUGUCGUUUUGGUCGGC - 58 |
Stem-loop(if miRNA) |
----CA     A           UC   ACC       AAACG UGUCGUUUUGG  GGC   C       ||||| |||||||||||  |||       UUUGC GCAGCAAAAUC  CCG   U GUGUAC     C           --   AAU |
Stem-loop sequence | CAAAACGAUGUCGUUUUGGUCGGCACCCUUAAGCCCUAAAACGACGCCGUUUCAUGUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017771280.1 |
|
1.5 | PREDICTED: Gossypium arboreum 40S ribosomal protein S27-2 (LOC108470075), mRNA | 40S ribosomal protein S27-2(LOC108470075) | coding protein | psRNATarget |