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BaseInfo

ncRNA ID novel_gar_miR2118
Species Gossypium arboreum
Class miRNA
Genome position Chr13:85196416-85196624 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 18
Mature sequence(if miRNA) 192 - GGGACACUGAUGGUCGGC - 209
Stem-loop(if miRNA) --   AC   -          A     G                         A     UGU     -    UUU     A  UA    UUUUUGACUU      -U  A  A
  GGG  ACU GAUGGUCGGC UCCUU UAGAAUGUUCGUGUUUUCUUAUAUU UUAUU   GUAAU AUUA   GUUGG AU  UAUA          AAUAUU  GU CU U
  |||  ||| |||||||||| ||||| ||||||||||||||||||||||||| |||||   ||||| ||||   ||||| ||  ||||          ||||||  || || G
  CCC  UGA CUAUCGGUCG AGGAA AUCUUACAAGCACAAAAGAAUAUAA AAUAG   CGUUA UAGU   CAACC UA  AUAU          UUAUAA  CA GA C
AA   CA   U          C     G                         A     ---     A    --U     G  UC    ---------U      UU  -  C
Stem-loop sequence GGGACACUGAUGGUCGGCAUCCUUGUAGAAUGUUCGUGUUUUCUUAUAUUAUUAUUUGUGUAAUAUUAUUUGUUGGAAUUAUAUAUUUUUGACUUAAUAUUUGUACUAUGCCAGACUUAAUAUUUUAUACUAUGCCAACUUGAUAAUUGCGAUAAAAAUAUAAGAAAACACGAACAUUCUAGAAGGACGCUGGCUAUCUAGUACCCCAA