ncRNA ID | novel_gar_miR2118 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr13:85196416-85196624 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 18 |
Mature sequence(if miRNA) | 192 - GGGACACUGAUGGUCGGC - 209 |
Stem-loop(if miRNA) |
--   AC   -          A     G                         A     UGU     -    UUU     A  UA    UUUUUGACUU      -U  A  A   GGG  ACU GAUGGUCGGC UCCUU UAGAAUGUUCGUGUUUUCUUAUAUU UUAUU   GUAAU AUUA   GUUGG AU  UAUA          AAUAUU  GU CU U   |||  ||| |||||||||| ||||| ||||||||||||||||||||||||| |||||   ||||| ||||   ||||| ||  ||||          ||||||  || || G   CCC  UGA CUAUCGGUCG AGGAA AUCUUACAAGCACAAAAGAAUAUAA AAUAG   CGUUA UAGU   CAACC UA  AUAU          UUAUAA  CA GA C AA   CA   U          C     G                         A     ---     A    --U     G  UC    ---------U      UU  -  C |
Stem-loop sequence | GGGACACUGAUGGUCGGCAUCCUUGUAGAAUGUUCGUGUUUUCUUAUAUUAUUAUUUGUGUAAUAUUAUUUGUUGGAAUUAUAUAUUUUUGACUUAAUAUUUGUACUAUGCCAGACUUAAUAUUUUAUACUAUGCCAACUUGAUAAUUGCGAUAAAAAUAUAAGAAAACACGAACAUUCUAGAAGGACGCUGGCUAUCUAGUACCCCAA |