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BaseInfo

ncRNA ID novel_gar_miR2116
Species Gossypium arboreum
Class miRNA
Genome position Chr13:21133878-21133982 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - CCACUAAAGAACGAGCAUUAGCGG - 24
Stem-loop(if miRNA) --  A       A          C    C      A   -   C    UAU U
  CC CUAAAGA CGAGCAUUAG GGCG UUUUUA AAA CGC GCUA   G A
  || ||||||| |||||||||| |||| |||||| ||| ||| ||||   | C
  GG GAUUUCU GUUCGUAAUC CCGU AAAGAU UUU GCG CGAU   C A
AC  C       A          A    A      G   C   A    -UU A
Stem-loop sequence CCACUAAAGAACGAGCAUUAGCGGCGCUUUUUAAAAACGCCGCUAUAUGUACAACUUUAGCAGCGCUUUGUAGAAAAUGCCACUAAUGCUUGAUCUUUAGCGGCA