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BaseInfo

ncRNA ID	ath-miRf11151-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AGCUCCGGCAAUGAUUGAGG - NA
Stem-loop(if miRNA)	UC    A   C       G   GA        CUCU   AAGUUGUUGCCUUGAGAAGAUGGAUGGCUGUGUCCCUGAGAGUUGGGAUUUGGAGACUCCGGUAGCUCUUG   UUGU GCU CGGCAAU AUU  GGAGCUCC    UGA                                                                       G   |||| ||| ||||||| |||  ||||||||    |||   GGCG CGA GUCGUUG UAA  UUUCGAGG    GUG                                                                       U -A    G   C       A   GG        --UG   AAUCGCACAACUAGGCGGCGGUGGCGCUAGACUUCUCCGCGUCAAAUUAGGUGGCGGUAUUCUAGGAGAUU
Stem-loop sequence	UCUUGUAGCUCCGGCAAUGAUUGAGGAGCUCCCUCUUGAAAGUUGUUGCCUUGAGAAGAUGGAUGGCUGUGUCCCUGAGAGUUGGGAUUUGGAGACUCCGGUAGCUCUUGGUUUAGAGGAUCUUAUGGCGGUGGAUUAAACUGCGCCUCUUCAGAUCGCGGUGGCGGCGGAUCAACACGCUAAGUGGUGGAGCUUUGGAAUAGUUGCUGCAGCGGCGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AM236861.1	ncRNA:20   GGAGUUAGUAACGGCCUCGA   1   ||*|||||||*||||||||| targets:35   CCGCAAUCAUCGCCGGAGCU   54 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for mitochondrial dicarboxylate carrier (at5g09470 gene), from flower bud	NA	coding protein	psRNATarget
BT033087.1	ncRNA:20   GGAGUUAGUAACGGCCUCGA   1   ||*|||||||*||||||||| targets:35   CCGCAAUCAUCGCCGGAGCU   54 Target Full Sequence	2.5	Arabidopsis thaliana unknown protein (At5g09470) mRNA, complete cds	NA	coding protein	psRNATarget
NM_120984.2	ncRNA:20   GGAGUUAGUAACGGCCUCGA   1   ||*|||||||*||||||||| targets:217   CCGCAAUCAUCGCCGGAGCU   236 Target Full Sequence	2.5	Arabidopsis thaliana dicarboxylate carrier 3 (DIC3), mRNA	dicarboxylate carrier 3(DIC3)	coding protein	psRNATarget
AF082300.1	ncRNA:20   GGAGUUAGUAACGGCCUCGA   1   *|*||=|||||||||||||* targets:450   GCACAGUCAUUGCCGGAGCC   469 Target Full Sequence	3.0	Arabidopsis thaliana arabinogalactan-protein (AGP3) mRNA, complete cds	NA	coding protein	psRNATarget
AK227480.1	ncRNA:20   GGAGUUAGUAACGGCCUCGA   1   *|*||=|||||||||||||* targets:461   GCACAGUCAUUGCCGGAGCC   480 Target Full Sequence	3.0	Arabidopsis thaliana mRNA for arabinogalactan-protein, clone: RAFL14-11-E16	NA	coding protein	psRNATarget
NM_120175.5	ncRNA:20   GGAGUUAGUAACGGCCUCGA   1   *|*||=|||||||||||||* targets:572   GCACAGUCAUUGCCGGAGCC   591 Target Full Sequence	3.0	Arabidopsis thaliana arabinogalactan protein 3 (AGP3), mRNA	arabinogalactan protein 3(AGP3)	coding protein	psRNATarget