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BaseInfo

ncRNA ID novel_gar_miR2099
Species Gossypium arboreum
Class miRNA
Genome position Chr13:106684015-106684169 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 132 - CUAAAGGUCUUGACCUCUAGCGGC - 155
Stem-loop(if miRNA) --     A            C   C       GUGGGAA      C    A            C     --  G   G
  CGCUA AGGUCAAGACCU UAG GGCGUUU       AAGCGC GCUA AGGUCAAGACCU UAGCG  GC UUU U
  ||||| |||||||||||| ||| |||||||       |||||| |||| |||||||||||| |||||  || ||| G
  GCGAU UCCAGUUCUGGA AUC CCGCGAA       UUUGCG CGAU UCCAGUUCUGGA AUCGC  UG AAG G
CG     C            A   A       AGGGGUG      A    C            A     GA  A   G
Stem-loop sequence CGCUAAAGGUCAAGACCUCUAGCGGCGUUUGUGGGAAAAGCGCCGCUAAAGGUCAAGACCUCUAGCGGCGUUUGUGGGGAAAGUAGCGCUAAAGGUCUUGACCUCUAGCAGCGUUUGUGGGGAAAGCGCCACUAAAGGUCUUGACCUCUAGCGGC