ncRNA ID | novel_gar_miR2093 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:34370240-34370322 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACAGUUGGUAUACAUGGCUGCUA - 24 |
Stem-loop(if miRNA) |
--A      -      A         -  UAGAAAAG   AAA    CAGUUG GUAUAC UGGCUGUUG GU        AUA   A    |||||| |||||| ||||||||| ||        |||   A    GUCGGU CAUAUG GUUGACAAU CG        UAU   U AUC      A      -         U  -UUAAACA   AGU |
Stem-loop sequence | ACAGUUGGUAUACAUGGCUGUUGGUUAGAAAAGAUAAAAAAUUGAUAUACAAAUUGCUUAACAGUUGGUAUACAUGGCUGCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784387.1 |
|
2.5 | PREDICTED: Gossypium arboreum pectinesterase QRT1-like (LOC108481226), mRNA | pectinesterase QRT1-like(LOC108481226) | coding protein | psRNATarget | |||||||||
XM_017784386.1 |
|
2.5 | PREDICTED: Gossypium arboreum pectinesterase QRT1-like (LOC108481225), mRNA | pectinesterase QRT1-like(LOC108481225) | coding protein | psRNATarget |