ncRNA ID | novel_gar_miR2091 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:39308441-39308504 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUUUGUGCUGACGUGGACAAAACA - 24 |
Stem-loop(if miRNA) |
--                         UU  U   UUUUGUCCACGUCAGCAUAAAGUGC  CC U   |||||||||||||||||||||||||  || G   AAAACAGGUGCAGUCGUGUUUCGCG  GG A AC                         -C  A |
Stem-loop sequence | UUUUGUCCACGUCAGCAUAAAGUGCUUCCUUGAAGGCGCGCUUUGUGCUGACGUGGACAAAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017784438.1 |
|
1.5 | PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA | serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) | coding protein | psRNATarget | |||||||||
XM_017780527.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108478102 (LOC108478102), mRNA | uncharacterized LOC108478102(LOC108478102) | coding protein | psRNATarget |