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BaseInfo

ncRNA ID novel_gar_miR2091
Species Gossypium arboreum
Class miRNA
Genome position Chr1:39308441-39308504 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - CUUUGUGCUGACGUGGACAAAACA - 24
Stem-loop(if miRNA) --                         UU  U
  UUUUGUCCACGUCAGCAUAAAGUGC  CC U
  |||||||||||||||||||||||||  || G
  AAAACAGGUGCAGUCGUGUUUCGCG  GG A
AC                         -C  A
Stem-loop sequence UUUUGUCCACGUCAGCAUAAAGUGCUUCCUUGAAGGCGCGCUUUGUGCUGACGUGGACAAAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017784438.1
ncRNA:24   ACAAAACAGGUGCAGUCGUGUUUC   1
  *||||||||||=||||||||||||
targets:10   CGUUUUGUCCAUGUCAGCACAAAG   33

1.5 PREDICTED: Gossypium arboreum serine/threonine-protein phosphatase 7 long form homolog (LOC108481281), mRNA serine/threonine-protein phosphatase 7 long form homolog(LOC108481281) coding protein psRNATarget
XM_017780527.1
ncRNA:24   ACAAAACAGGUGCAGUCGUGUUUC   1
  ||*|||||||||*||||||||||*
targets:92   UGCUUUGUCCACAUCAGCACAAAU   115

2.5 PREDICTED: Gossypium arboreum uncharacterized LOC108478102 (LOC108478102), mRNA uncharacterized LOC108478102(LOC108478102) coding protein psRNATarget