Search result

BaseInfo

ncRNA ID novel_gar_miR2087
Species Gossypium arboreum
Class miRNA
Genome position Chr12:85134053-85134226 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - CCACACGGUCAGAGGCCACGGGCG - 24
Stem-loop(if miRNA) --C           A  C     G    CU        A   -UAGUU    -   -AACCU     AUUU G      --     AA   A
   CACACGGUCAG GG CACGG CGUG  UGGUGGCC UGU      UGGC AGU      CUUAA    U CACGGU  UAGGG  CAC A
   ||||||||||| || ||||| ||||  |||||||| |||      |||| |||      |||||    | ||||||  |||||  |||
   GUGUGCCGGUU UC GUGCU GCAC  GUUACUGG ACA      AUCG UCG      GAAUU    G GUGCCG  AUUCC  GUG G
AAA           A  U     G    AC        A   CUAUGU    A   AUAACU     ---C G      GU     --   C
Stem-loop sequence CCACACGGUCAGAGGCCACGGGCGUGCUUGGUGGCCAUGUUAGUUUGGCAGUAACCUCUUAAAUUUUGCACGGUUAGGGAACACAAGCGUGCCUUAUGGCCGUGGGCUUAAGUCAAUAGCUAGCUAUGUAUCACAAGGUCAUUGCACACGGUCGUGUCUAUUGGCCGUGUGAAA