ncRNA ID | novel_gar_miR2087 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr12:85134053-85134226 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCACACGGUCAGAGGCCACGGGCG - 24 |
Stem-loop(if miRNA) |
--C           A  C     G    CU        A   -UAGUU    -   -AACCU     AUUU G      --     AA   A    CACACGGUCAG GG CACGG CGUG  UGGUGGCC UGU      UGGC AGU      CUUAA    U CACGGU  UAGGG  CAC A    ||||||||||| || ||||| ||||  |||||||| |||      |||| |||      |||||    | ||||||  |||||  |||    GUGUGCCGGUU UC GUGCU GCAC  GUUACUGG ACA      AUCG UCG      GAAUU    G GUGCCG  AUUCC  GUG G AAA           A  U     G    AC        A   CUAUGU    A   AUAACU     ---C G      GU     --   C |
Stem-loop sequence | CCACACGGUCAGAGGCCACGGGCGUGCUUGGUGGCCAUGUUAGUUUGGCAGUAACCUCUUAAAUUUUGCACGGUUAGGGAACACAAGCGUGCCUUAUGGCCGUGGGCUUAAGUCAAUAGCUAGCUAUGUAUCACAAGGUCAUUGCACACGGUCGUGUCUAUUGGCCGUGUGAAA |