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BaseInfo

ncRNA ID novel_gar_miR2086
Species Gossypium arboreum
Class miRNA
Genome position Chr12:84564033-84564198 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - CACACGAGUAGACACACGAGCGUG - 24
Stem-loop(if miRNA) --      A  --         A  G       AG   -      GAC  -------------------------AC  UCCGCUCCAUGGGUGUGAGA
  CACACG GU  AGACACACG GC UGUGUCU  GCC GUGUGU   AC                           GG                    U
  |||||| ||  ||||||||| || |||||||  ||| ||||||   ||                           ||
  GUGUGC CG  UCUGUGUGC CG GUACAGA  CGG CACACA   UG                           CC                    C
AG      -  AC         -  -       GA   A      -AA  AUGACCCAUAAGACAAAAGUAAUUAAU  CACGUCCCCUGUGUACAGAU
Stem-loop sequence CACACGAGUAGACACACGAGCGUGUGUCUAGGCCGUGUGUGACACACGGUCCGCUCCAUGGGUGUGAGAUCUAGACAUGUGUCCCCUGCACCCUAAUUAAUGAAAACAGAAUACCCAGUAGUAAACACACAGGCAGAGACAUGGCCGUGUGUCUCAGCCGUGUGGA