ncRNA ID | novel_gar_miR2084 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr1:50091043-50091119 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 54 - AUACUGUAUUCCUUUGAAACAAGC - 77 |
Stem-loop(if miRNA) |
--    U  A   C          GCAAAUCU    GUG A   AUAC GU UUC UUUGAAACAA        UGAC   C A   |||| || ||| ||||||||||        ||||   | U   UAUG UA AAG AAAUUUUGUU        ACUG   G U UU    C  -   A          ---AACUU    --A U |
Stem-loop sequence | AUACUGUAUUCCUUUGAAACAAGCAAAUCUUGACGUGCAAUUUGAGUCAUUCAAUUGUUUUAAAAGAAAUCGUAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017767062.1 |
|
2.5 | PREDICTED: Gossypium arboreum potassium transporter 5 (LOC108466688), mRNA | potassium transporter 5(LOC108466688) | coding protein | psRNATarget |