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BaseInfo

ncRNA ID	ath-miRf11149-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - ACUUUUCACUGUUUGAUUCGU - NA
Stem-loop(if miRNA)	--       C            A     ----   U    G CAAAGUAGUCACUUUUCACUGUUUGAUUCGUACACUUGGAU  UACAUCA UUUUAGUGUACA AUGUA    AAG GUAC C |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||| |||||    ||| |||| U GUUUUAUCAGUGAAAAGUGACAAACUAAGCAUGUGAAUCUA  AUGUGGU AAAAUCACAUGU UACAU    UUU UAUG G                                          AC       A            C     AUAU   U    U
Stem-loop sequence	CAAAGUAGUCACUUUUCACUGUUUGAUUCGUACACUUGGAUUACAUCACUUUUAGUGUACAAAUGUAAAGUGUACGCUGUGUAUUUUUUAUAUACAUCUGUACACUAAAAAUGGUGUACAAUCUAAGUGUACGAAUCAAACAGUGAAAAGUGACUAUUUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AF223948.1	ncRNA:21   UGCUUAGUUUGUCACUUUUCA   1   ||*|||*|||||||||||||| targets:1188   ACAAAUAAAACAGUGAAAAGU   1208 Target Full Sequence	2.0	Arabidopsis thaliana biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA, nuclear gene encoding plastid protein, complete cds	NA	coding protein	psRNATarget
NM_121557.4	ncRNA:21   UGCUUAGUUUGUCACUUUUCA   1   ||*|||*|||||||||||||| targets:1487   ACAAAUAAAACAGUGAAAAGU   1507 Target Full Sequence	2.0	Arabidopsis thaliana biotin carboxyl carrier protein 2 (BCCP2), mRNA	biotin carboxyl carrier protein 2(BCCP2)	coding protein	psRNATarget
AY091008.1	ncRNA:21   UGCUUA-GUUUGUCACUUUUCA   1   |=||||-||||||||||||||* targets:479   AUGAAUUCAAACAGUGAAAAGC   500 Target Full Sequence	3.0	Arabidopsis thaliana putative vacuolar proton-ATPase subunit (At2g28520) mRNA, complete cds	NA	coding protein	psRNATarget
NM_179791.2	ncRNA:21   UGCUUA-GUUUGUCACUUUUCA   1   |=||||-||||||||||||||* targets:575   AUGAAUUCAAACAGUGAAAAGC   596 Target Full Sequence	3.0	Arabidopsis thaliana vacuolar proton ATPase A1 (VHA-A1), mRNA	vacuolar proton ATPase A1(VHA-A1)	coding protein	psRNATarget