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BaseInfo

ncRNA ID	novel_gar_miR2081
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr12:70977201-70977357 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029587
Length	21
Mature sequence(if miRNA)	137 - AGUCUUGCAAGAGGGGCUUAA - 157
Stem-loop(if miRNA)	--AU       C     AG       A    U      CA    A                   --------CA    A   U     GCCCCUC UGCAA  CUAACCA UAAU UAUAUA  UGUA UCAUGUCAUCACUUAUCAU          UGCU GUG A     ||||||| |||||  ||||||| |||| ||||||  |||| |||||||||||||||||||          |||| ||| A     CGGGGAG ACGUU  GAUUGGU AUUG AUAUAU  ACAU AGUAUAGUAGUGAAUGGUA          ACGG CAC G AAUU       A     CU       G    U      --    G                   UUAAAAACAC    A   G
Stem-loop sequence	AUGCCCCUCCUGCAAAGCUAACCAAUAAUUUAUAUACAUGUAAUCAUGUCAUCACUUAUCAUCAUGCUAGUGUAAGGCACAGGCACACAAAAAUUAUGGUAAGUGAUGAUAUGAGUACAUAUAUAUGUUAGUGGUUAGUCUUGCAAGAGGGGCUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017760780.1	ncRNA:21   AAUUCGGGGAGAACGUUCUGA   1   |*|*||==||||||||||||| targets:1927   UCACGCUUCUCUUGCAAGACU   1947 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum kinesin KP1 (LOC108461062), transcript variant X3, mRNA	kinesin KP1(LOC108461062)	coding protein	psRNATarget
XM_017760778.1	ncRNA:21   AAUUCGGGGAGAACGUUCUGA   1   |*|*||==||||||||||||| targets:2053   UCACGCUUCUCUUGCAAGACU   2073 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum kinesin KP1 (LOC108461062), transcript variant X1, mRNA	kinesin KP1(LOC108461062)	coding protein	psRNATarget
XM_017760779.1	ncRNA:21   AAUUCGGGGAGAACGUUCUGA   1   |*|*||==||||||||||||| targets:2054   UCACGCUUCUCUUGCAAGACU   2074 Target Full Sequence	3.0	PREDICTED: Gossypium arboreum kinesin KP1 (LOC108461062), transcript variant X2, mRNA	kinesin KP1(LOC108461062)	coding protein	psRNATarget