| ncRNA ID | novel_gar_miR2080 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr1:56292494-56292697 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029586 |
| Length | 24 |
| Mature sequence(if miRNA) | 181 - AGUGACGCCACAUCAUCUGUAUCU - 204 |
| Stem-loop(if miRNA) |
-- A A C ---UU U UA AGUGACGCCAC UCAUCUGUAUCUCUUUCCAAUAGUUUUAUGCCACAUCAGUAUUCUUAUCCU AAUUUCAGGA UUUAUUUUGAA UCAG AUUU A ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||| UCACUGCGGUG AGUAGACAUAGGGAAAGGUUAUCAAAAUACGGUGUAGUCAUGAGAAUAGGA UUAAAGUCCU AAAUAGGACUU AGUU UAGG U UA C C A UUUUU - UU |
| Stem-loop sequence | AGUGACGCCACAUCAUCUGUAUCUCUUUCCAAUAGUUUUAUGCCACAUCAGUAUUCUUAUCCUAAAUUUCAGGACUUUAUUUUGAAUUUCAGUAUUUUAAUUUGGAUUUGAUUUUUUUCAGGAUAAAAUCCUGAAAUUCAGGAUAAGAGUACUGAUGUGGCAUAAAACUAUUGGAAAGGGAUACAGAUGACGUGGCGUCACUAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017758885.1 |
|
1.5 | PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA | enolase-like(LOC108459500) | coding protein | psRNATarget |