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BaseInfo

ncRNA ID novel_gar_miR2077
Species Gossypium arboreum
Class miRNA
Genome position Chr1:58515743-58515824 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 21
Mature sequence(if miRNA) 62 - UGGGGAAGCGCUUUGUCCACA - 82
Stem-loop(if miRNA) ---U     A             A       AA     GU  U
    GGGGA GCGCUUUGUCCAC UCAACAA  AGCGC  CC U
    ||||| ||||||||||||| |||||||  |||||  ||
    CCCCU CGCGAAACAGGUG AGUUGUU  UCGCG  GG G
GGAU     -             C       --     UG  A
Stem-loop sequence UGGGGAAGCGCUUUGUCCACAUCAACAAAAAGCGCGUCCUUGAGGGUGCGCUUUGUUGACGUGGACAAAGCGCUCCCCUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017780527.1
ncRNA:21   ACACCUGUUUCGCGAAGGGGU   1
  ||||||||||||||||||=||
targets:145   UGUGGACAAAGCGCUUCCUCA   165

1.5 PREDICTED: Gossypium arboreum uncharacterized LOC108478102 (LOC108478102), mRNA uncharacterized LOC108478102(LOC108478102) coding protein psRNATarget