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BaseInfo

ncRNA ID novel_gar_miR2074
Species Gossypium arboreum
Class miRNA
Genome position Chr1:66544422-66544617 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - AAUGGAUAGAGAUGAGAUGGAAUC - 24
Stem-loop(if miRNA) --     CG     C      -C    G           A                --  UCCUAAUUUUAGCAUUUUAGUUGGAUUUGAAUUUGUUCAG
  UUUCA  UCAUC CUAUUC  UUUC AAUAGGAGAAU AUAAAUUAGAUUUUUU  UC                                        G
  |||||  ||||| ||||||  |||| ||||||||||| ||||||||||||||||  ||
  AAGGU  AGUAG GAUAGG  AAAG UUAUUCUUUUA UGUUUAGUCUAAAAAG  GA                                        A
CU     AG     A      UA    -           C                AA  AUUAAAAAUCAAAAAAAGAAGGAUUAAAAAUCAAAAAAUG
Stem-loop sequence UUUCACGUCAUCCCUAUUCCUUUCGAAUAGGAGAAUAAUAAAUUAGAUUUUUUUCUCCUAAUUUUAGCAUUUUAGUUGGAUUUGAAUUUGUUCAGGAGUAAAAAACUAAAAAUUAGGAAGAAAAAAACUAAAAAUUAAGAAGAAAAAUCUGAUUUGUCAUUUUCUUAUUGAAAAUGGAUAGAGAUGAGAUGGAAUC