| ncRNA ID | novel_gar_miR2072 |
| Species | Gossypium arboreum |
| Class | miRNA |
| Genome position | Chr10:57154814-57154964 [-] |
| Reference genome | Gossypium_arboreum_v1.0 |
| Source | SRR1029586 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGAUGCAUUAUUUGAUUGUACUGA - 24 |
| Stem-loop(if miRNA) |
--AA UG U U G GU C CAA GC ---U CC UAUAAU AGU AU CAU UU CCACCACCAU GAAGG UGGCCUUUUUA AUAACCUGU ACA C |||||| ||| || ||| || |||||||||| ||||| ||||||||||| ||||||||| ||| AUGUUA UUA UA GUA AA GGUGGUGGUG CUUCC ACUGGGGAAAU UAUUGGAUA UGU C AGUC GU U C G UG A ACC AA CUAU AA |
| Stem-loop sequence | AAUAUAAUUGAGUUAUUCAUGUUGUCCACCACCAUCGAAGGCAAUGGCCUUUUUAGCAUAACCUGUUACACCCCAAUGUUAUCAUAGGUUAUAAUAAAGGGGUCACCACCUUCAGUGGUGGUGGGUAAGAUGCAUUAUUUGAUUGUACUGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_017757255.1 |
|
2.5 | PREDICTED: Gossypium arboreum zinc finger CCCH domain-containing protein 16 (LOC108458023), transcript variant X2, mRNA | zinc finger CCCH domain-containing protein 16(LOC108458023) | coding protein | psRNATarget | |||||||||
| XM_017757254.1 |
|
2.5 | PREDICTED: Gossypium arboreum zinc finger CCCH domain-containing protein 16 (LOC108458023), transcript variant X1, mRNA | zinc finger CCCH domain-containing protein 16(LOC108458023) | coding protein | psRNATarget |